Run GramAlign

Output Format:

Input FASTA Sequence:

-OR-

Input FASTA File*:

*Input files limited to 10MB.

Show Additional Options

File Options

Input File Format:

Gap Costs

Open: (Default: 15.2 protein, 8.7 DNA)
Tail Open: (Default: 15.2 protein, 8.7 DNA)
Extension: (Default: 0.6 protein, 0.8 DNA)
Tail Extension: (Default: 0.3 protein, 0.4 DNA)

Gap Adjustments

Threshold:(Default: 1.0)
Window:(Default: 0)

Protein Parameters

Substitution Matrix:

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