
This folder contains synthetic metagenome test data with the fragment lengths of 100 bp, 200 bp and 400 bp. The files are "testseqs_100bp.fna", "testseqs_200bp.fna", and "testseqs_400bp.fna" respectively.

To run the test, run RAIphy with the database provided "TestDatabase.db" and use one of the test files as input. That will employ a cross-validation test.

The accuracy and fragment-by-fragment results of the test can be checked using the python script (http://www.python.org/), CompareResults.py. The usage of this script is:

CompareResults.py <RAIphy_OUTPUT_FILE> testlabels.txt > TestResults.txt


"TestResults.txt" file will contain the comparison and correst prediction percentage.